Try a repair install from the CD. It should sort out the MBR (master boot record).
Ideally, you want to unplug all your drive except the one with Windows on, or it might install the MBR on another drive gain. I assume that's on your SSD.
I had the same problem installing on SSD, and having the MBR installed on a hard drive. That little trick did the job.
- turn off the PSU first.
- unplug the mains.
- wait for the lights on the motherboard to go out (meaning all power drained from the PSU).
- unplug the hard drives, leave SSD plugged in.
- plug the power supply back.
- set CD as first boot device in the bios.
- Boot from CD, run a repair.
- let it do its thing, repairing the MBR and starting windows (I think).
- shutdown windows.
- switch off PSU and unplug it again.
- plug the hard drives back in.
- set the SSD as first boot device in the bios.
- reboot.
