I would say if you want to run some sort of RAID setup then it 'might' be better to have several smaller HD drives - or if you need a strong backup in the event of a failure.
If you are looking for a fast/cheap combo then an SSD for O/S and a large HD drive for storage would be the preferred option.
Myself, I'm going to buy a Samsung 840 EVO in about 5 mins to go with my two 1 TB Samsung F1's
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