Not sure what you mean there. Air coolers are designed so that the fan can also cool below the area surrounding the CPU. The middle fan of the NH-D14 is 140mm not only for better performance/noise ratio but to also help dissipate heat from MOSFET/NB heatsinks. In fact, there is little difference in motherboard temps comparing a tower cooler to a top down cooler that is designed with that very purpose in mind. Reviewers probably don't mention motherboard (not necessarily chipset) temperatures because sensors might be located in various places that may have little influence from any coolers and most motherboards these days have effective heatsinks that can cool the various onboard components.
As for airflow, air coolers compliment chassis airflow much better. In fact, whenever I've used Corsair ALC coolers, my chassis temperature increases because they are designed to intake air which in my case leaves me with no exhausts. Switching the orientation leads to poorer temperature but better internal temperature so why should I have to reach a compromise when a tower cooler just works.
Also I'm very skeptical about how adding a second fan would reduce temperatures by 10C. The radiators on those ALC units are so small that lack of airflow isn't the biggest limiting factor as such, it's the surface area. I would argue that such a difference in temp is due to changes in ambient temperature or the fact that you've just installed the fan and tested it when the system hadn't been on for a while. I would expect a 5C change max.
Anyway, ALC coolers have their places but for me considering costs, noise, and sheer performance, air coolers will always win. I don't say that because I'm defending them but because that's the experience I've had.