I always get an extra bottle for what I think will do the trick. I have 3 litres in a drawer for example for when I need to do changes and whatnot. Its always better to have more than it is to have less, also fluids come with a typical 3 year shelf life and if your changing every 6 months as they suggest your gonna need some anyway.
I typically have 1-2 DI water for flushing the system and then whatever fluid I need.
As for filling, I just keep filling until the whole thing is full. Ive got a loop with CPU, 2 GPU's and a 360mm RAD (im adding more rads soon!) and that uses less than 1 pack of tubing and for fluids it uses less than 1 litre. I still like to keep more on hand just in case.