I know I replied to these earlier and it was over a week ago but I've investigated and can confirm that this is all correctly modelled in the sim. I hadn't specifically noticed when I was testing at the time but I did have reduced thrust, down from a possible 107% N1 at full throttle to about 95%, which is enough to take off and maintain flight.
I just wanted to return and add closure to that part.
I remain respectfully unconvinced.
What exactly is the sim modelling?
Just because the developer has put in a line of code that effectively says reduce N1 by 12% if fuel pumps off does not mean that the sim is correctly modelling a takeoff with no fuel pumps. (Are the fuel flow and EGT parameters different as well? - In this case compared to 95% N1 with fuel pumps on)
In order to be able to model this, the developer would have to have access to real world flight test data showing the behavior of those particular engines at take-off thrust with no ancillary fuel pumps. I doubt very much if he has access to this as I imagine it's proprietary and not widely available. (If it even exists)
There will be failure modes associated with low or abnormal fuel pressure, the ones I can think of would possibly be abnormal EGT, low idle, possible engine surge, abnormal thrust lever response. I'm sure there are others I'm not aware of. Possibly some of these failure modes are not well understood. And unless the sim is correctly modelling possible failure modes, it's not correctly modelling the engine performance under these conditions. I assume the sim has selectable failures - what are they with regards to the engines?
I personally doubt that even a level D full flight sim would correctly model this.
So, I think we'll have to agree to disagree on this one.
(I'm currently spec'ing out a new PC to run flight sim as I want to get back into it, and to teach my son to fly - start em young. So will probably try to have a play around with some of the pro add-ons and report back but I think there's a different thread for that)
Edit: Just to add, I don't doubt that the your sim is a very good representation of an actual 747 but that you are using it to support conclusions that are not warranted, from what is a rather niche area of aircraft performance, where actual performance data is not available.