Yes there has been some good stuff here and many thanks to you all.
What I am currently having problems getting my head around is focal length and shutter speed and how I go about setting these correctly. I am assuming that Auto is not good for this? Would I need to be in either TV or AV mode to change these settings?
It likely doesn't matter if you are on Tv mode or Av mode in this instance.
What I tend to do is use Av mode and set the aperture wide open (lowest f number, so f/5.6 on your lens). I then use Auto-ISO to ensure the the desired shutter speed, so on your lens I might set a desired speed of 1/500th of a second and a max ISO of 3200.
It is also perfectly fine to control the ISO yourself, just increase the ISO until you get your desired shutter speed, and remember to decrease the shutter speed when the light level increases. This is very easy to do but it just another step in the process that you don't really care about but needs to be done, so it is perfectly fine to let the camera deal with the ISO and let you concentrate on composition.
When you are aperture mode you will have the flexibility of stopping the lens down a little if you need a greater DoF (or to improve image quality). When you want to maintain a certain fixed shutter speed like 1/500ths then typically you would use the Tv mode and dial in 1/500th . However, with your lens this means the camera will chose the widest aperture and you will still need to use auto-ISO or control the ISO yourself, so it ends up being the same thing as using the Av mode. The Av mode just has the small advantage of stopping down easily when desired.
Think of filling a bucket of water form a tap. The wider open you turn the tap the faster the water comes out and the quicker the bucket fills. this is equivalent to lens aperture. The goal is always to fill the bucket up to the top without spilling. You can have a smaller aperture and the bucket fills more slowly, or a wider aperture and the bucket fills fast. ISO is a bit like have multiple taps. So at ISO 100 you have 1 tap and at ISO 200 you have 2 taps, and ISO 400 you have 4 taps, etc. that all open and close together to the same aperture. With more taps open at high ISO then the faster the bucket fills.
There are 2 caveats with this analogy.
1) The aperture (how open the tap is) has a profound effect on the image.
Compare the flowers at f/5.6
http://en.wikipedia.org/wiki/File:Jonquil_flowers_at_f5.jpg
and
f/32
http://en.wikipedia.org/wiki/File:Jonquil_flowers_at_f32.jpg
2) At high ISO the image quality degrades so you want to keep these low if possible.