"CPU Fan Error - Press F1 to Resume"

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Stock Intel heat-sink was doing a horrible job and i wanted some room for over-clocking in order to get bit more punch from my CPU which is starting to show its age, so i splashed out on a Noctua NH-C12P SE14. I've not got round to the over-clocking yet but i can confidently say the cooler is doing an amazing job, aside from one hiccup: Every-time i start up the Desktop it gives me the usual "beep" to show that it's working but a few seconds later it gives me another long beep followed by 4 shorter ones, by which point the monitor displays "CPU Fan Error! Press F1 to Resume".

The fan itself doesn't rotate correctly half the time on start-up. By that i mean it rocks on its axis and never makes a full rotation. Half the time it will start up fine, but for the other half the blades will sway back and forth and it cannot perform a 360 spin. If that happens then i usually tilt the Desktop and it will churn over, running fine there-after: Minus the odd start, the fan itself seems to work perfectly and it does a great job at keeping temperatures down during high loads. Literally, if you ignore the dodgy start then you would never think anything was wrong.

I've checked the connections and it's all secure. Not quite sure what is going on, any help to offer me?
 
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Sometimes it means you have just plugged it into the wrong header. If its in a regular case fan header that will be why. Try changing where it is plugged in
 
Oops, posted a bit too early and didn't finish off the first post! Now edited the extra bits in, appreciate if you guys could re-read it. Sorry about that.

I will double check the headers.
 
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There will be a header that's specifically for the CPU and it'll be labelled CPU Fan header. Just make sure you connect the fan to that. I doubt there's anything wrong with the fan itself.
 
There will be a header that's specifically for the CPU and it'll be labelled CPU Fan header. Just make sure you connect the fan to that. I doubt there's anything wrong with the fan itself.

Does not matter which one you put it one. You will get a bios error if its not on the cpu one but you can just set it to be ignored. That's what everyone does who water cools
 
Turns out i had plugged it into the wrong socket, instead of CPU FAN i had it in the CHA FAN2. However the same problem is still happening with it not always automatically rotating correctly on start-up. Minus the change of connection everything is the same as before, error message and everything.

Not sure if this is obvious already (i'm not a hardware savvy person) but the reason i initially had it in the CHA FAN2 header is because it's 3 pinned, much like the wired connector is for the fan itself. The CPU FAN is 4 pinned (but accepts 3 pins), so could that be why my fan isn't starting correctly half the time? Is it not getting enough "juice" from those 3 pins and requires a 4 pin connector to reach full potential and run perfectly?
 
It is because it is temperature controlled and will not run at full rpm until the cpu heats up. Just set to ignore fan error on start up or set a fan profile to keep it running at low temperatures.
 
I had the same problem with my Asus p8p67 pro, for me, it was just that it thinks the CPU fan isn't spinning fast enough (and therefore thinks there's something wrong), so I just set the fan warning rpm to a lower value (400rpm if memory serves), and it's fine. Also, the reason it might not start up, is it's trying to spin too slowly to get started, not sure if there's a minimum fan speed that you can set, but if there is, try inceasing the value.
 
Thanks for the replies. Would those minimum RPM/Fan settings be in the BIOS menu that you can access during start-up? Sorry if that's a stupid question, this stuff is pretty new to me and i feel a little out of my depth.
 
Are there any other possibilities/things i can try before i deem it faulty? I mean, it's only the start-up spin which is an issue so it seems odd that the fan would be the problem if it effectively cools and does it's job. Hope that made sense.
 
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