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My 6870's are flat out in BF3!
Have you tried a complete driver removal including running driver sweeper then reinstalling CCC and CAP?
I'm stumped then, the only time I don't get 100% usage on both cards at 1080 is when using 11.9 w/cap4.
Have a look around im 99% sure there is an inbuilt tool in BF3 to show performance spikes relating to either CPU or GPU bottlenecks. Could show you where to start looking...